Roulette

Center for cell and virus theory, Indiana University




Input

Number of Enzimes
Number of Ribosomes
Time Steps

Gene Probability
A U
G C

jump on probability

The input should be in this format P(G1) (P(G1)+P(G2)) (P(G1)+P(G2)+P(G3)) ... 1. If set to automatic the probabilities of transition from the pool to all genes will be equal


jump off probability

This is the probability of jumping from the end of the RNA to the pool


Codon Probability
NAME 3-letters Abbreviation 1-letter AbbreviationDNA codons for each Amino AcidsTransition Probability
Alanine Ala A GCA,GCC,GCG,GCU
Cysteine Cys C UGC,UGU
Aspartic_Acid Asp D GAC,GAU
Glutamic_Acid Glu E GAA,GAG
Phenylalanine Phe F UUC,UUU
Glycine Gly G GGA,GGC,GGG,GGU
Histidine His H CAC,CAU
Isoleucine Ile I AUA,AUC,AUU
Lysine Lys K AAA,AAG
Leucine Leu L UUA,UUG,CUA,CUC,CUG,CUU
Methionine Met M AUG
Asparagine Asn N AAC,AAU
Proline Pro P CCA,CCC,CCG,CCU
Glutamine Gln Q CAA,CAG
Arginine Arg R CGA,CGC,CGG,CGU
Serine Ser S UCA,UCC,UCG,UCU,AGC,AGU
Threonine Thr T ACA,ACC,ACG,ACU
Valine Val V GUA,GUC,GUG,GUU
Tryptophan Trp W UGG
Tyrosine Tyr Y UAC,UAU

Gene Sequence

The Gene Sequences Format should be in the following format: gene sequence 1 (new line) gene sequence 2 (new line ...etc)